Human Developmental Biology Resource (HDBR)

HDBR Expression

HDBR EXPRESSION is a new online resource for studying human prenatal brain development.

There is an RNAseq data set (E-MTAB-4840) and a SNP dataset (E-MTAB-4843) which will be able to be viewed at: www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-4840 and www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-4843 respectively.

For more information about HDBR Expression see: Front. Neuroanat. http://dx.doi.org/10.3389/fnana.2016.00086

For a description of the dissections used to prepare the cortical slices see "Cortical regions explanatory notes" pdf below. The supplementary tables with details of all the tissues and omics data generated from them are given below for download.

 

 

Cortical regions explanatory notes

Download Size: 57k · Type: application/pdf

Amended Supplementary Table 1 (pdf version)

Tissues used for RNA-seq

Download Size: 708k · Type: application/pdf

Amended Supplementary Table 1 (Excel version)

Tissues used for RNA-seq

Download Size: 40k · Type: application/vnd.open

Amendments to Supplementary Table 1

Amendments made to table of tissue used for RNA seq

Download Size: 9k · Type: application/vnd.open

Supplementary Table 2 (pdf version)

Details of tissues used for SNP genotyping.

Download Size: 128k · Type: application/pdf

Supplementary Table 2 (Excel version)

Details of tissues used for SNP genotyping.

Download Size: 32k · Type: application/vnd.open

Supplementary Table 3 (pdf version)

Top 200 genes differentially expressed between 9-12 post-conception weeks.

Download Size: 74k · Type: application/pdf

Supplementary Table 3 (Excel version)

Top 200 genes differentially expressed between 9-12 post-conception weeks.

Download Size: 28k · Type: application/vnd.open

Supplementary Table 4 (pdf version)

Genes that are differentially expressed between anterior and posterior cortex at 9 post-conception weeks.

Download Size: 71k · Type: application/pdf

Supplementary Table 4 (Excel version)

Genes that are differentially expressed between anterior and posterior cortex at 9 post-conception weeks.

Download Size: 24k · Type: application/vnd.open